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    Academic Journals

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• The CHROMA cloud-top pressure retrieval algorithm for the Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) satellite mission.

  Authors:Andrew M. Sayer, Luca Lelli, Brian Cairns, Bastiaan van Diedenhoven, Amir Ibrahim, Kirk D. Knobelspiesse, et al.From:Atmospheric Measurement Techniques (Vol. 16, Issue 4) Peer-Reviewed

  Feb. 23, 2023321 words Brief article This paper provides the theoretical basis and simulated retrievals for the Cloud Height Retrieval from O.sub.2 Molecular Absorption (CHROMA) algorithm. Simulations are performed for the Ocean Color Instrument (OCI),...

• Effective uncertainty quantification for multi-angle polarimetric aerosol remote sensing over ocean.

  Authors:Meng Gao, Kirk Knobelspiesse, Bryan A. Franz, Peng-Wang Zhai, Andrew M. Sayer, Amir Ibrahim, et al.From:Atmospheric Measurement Techniques (Vol. 15, Issue 16) Peer-Reviewed

  Aug. 25, 2022316 words Brief article Multi-angle polarimetric (MAP) measurements can enable detailed characterization of aerosol microphysical and optical properties and improve atmospheric correction in ocean color remote sensing. Advanced retrieval...

• Inversion of multiangular polarimetric measurements over open and coastal ocean waters: a joint retrieval algorithm for aerosol and water-leaving radiance properties

  Authors:Meng Gao, Peng-Wang Zhai, Bryan A. Franz, Yongxiang Hu, Kirk Knobelspiesse, P. Jeremy Werdell, et al.From:Atmospheric Measurement Techniques (Vol. 12, Issue 7) Peer-Reviewed

  July 17, 2019335 words Brief article

  Ocean color remote sensing is a challenging task over coastal waters due to the complex optical properties of aerosols and hydrosols. In order to conduct accurate atmospheric correction, we previously implemented a...

• Three Revised Kalman Filtering Models for Short-Term Rail Transit Passenger Flow Prediction

  Authors:Pengpeng Jiao, Ruimin Li, Tuo Sun, Zenghao Hou, and Amir IbrahimFrom:Mathematical Problems in EngineeringPeer-Reviewed

  Annual 20165,958 words Article 1440LShort-term prediction of passenger flow is very important for the operation and management of a rail transit system. Based on the traditional Kalman filtering method, this paper puts forward three revised models for...

• Inversion of multiangular polarimetric measurements from the ACEPOL campaign: an application of improving aerosol property and hyperspectral ocean color retrievals.

  Authors:Meng Gao, Peng-Wang Zhai, Bryan A. Franz, Kirk Knobelspiesse, Amir Ibrahim, Brian Cairns, et al.From:Atmospheric Measurement Techniques (Vol. 13, Issue 7) Peer-Reviewed

  July 22, 2020375 words Brief article NASA's Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission, scheduled for launch in the time frame of late 2022 to early 2023, will carry the Ocean Color Instrument (OCI), a hyperspectral scanning radiometer, and...

• SNP Discovery and Chromosome Anchoring Provide the First Physically-Anchored Hexaploid Oat Map and Reveal Synteny with Model Species

  Authors:Rebekah E. Oliver, Nicholas A. Tinker, Gerard R. Lazo, Shiaoman Chao, Eric N. Jellen, Martin L. Carson, et al.From:PLoS ONE (Vol. 8, Issue 3) Peer-Reviewed

  Mar. 22, 20137,480 words Article 1460LAuthor(s): Rebekah E. Oliver 1 , Nicholas A. Tinker 2 , * , Gerard R. Lazo 3 , Shiaoman Chao 4 , Eric N. Jellen 5 , Martin L. Carson 6 , Howard W. Rines 7 , Donald E. Obert 8 , Joseph D. Lutz 1 , Irene Shackelford 9 ,...

• Open-ocean fish reveal an omnidirectional solution to camouflage in polarized environments

  Authors:Parrish C. Brady, Alexander A. Gilerson, George W. Kattawar, Janies M. Sullivan, Michael S. Twardowski, Heidi M. Dierssen, et al.From:Science (Vol. 350, Issue 6263) Peer-Reviewed

  Nov. 20, 2015131 words Author abstract

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• Validation of chromosomal locations of 90k array single nucleotide polymorphisms in US wheat

  Authors:Shuyu Liu, Silvano Ocheya Assanga, Smit Dhakal, Xiangkun Gu, Chor-Tee Tan, Yan Yang, et al.From:Crop Science (Vol. 56, Issue 1) Peer-Reviewed

  January-February 2016255 words Author abstract, Rep...

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• Comparative Systems Biology Reveals Allelic Variation Modulating Tocochromanol Profiles in Barley (Hordeum vulgare L.)

  Authors:Rebekah E. Oliver, Emir Islamovic, Donald E. Obert, Mitchell L. Wise, Lauri L. Herrin, An Hang, et al.From:PLoS ONE (Vol. 9, Issue 5) Peer-Reviewed

  May 12, 20147,515 words Article 1620LTocochromanols are recognized for nutritional content, plant stress response, and seed longevity. Here we present a systems biological approach to characterize and develop predictive assays for genes affecting...

• Efficient multi-angle polarimetric inversion of aerosols and ocean color powered by a deep neural network forward model.

  Authors:Meng Gao, Bryan A. Franz, Kirk Knobelspiesse, Peng-Wang Zhai, Vanderlei Martins, Sharon Burton, et al.From:Atmospheric Measurement Techniques (Vol. 14, Issue 6) Peer-Reviewed

  June 4, 2021409 words Article NASA's Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission, scheduled for launch in the timeframe of 2023, will carry a hyperspectral scanning radiometer named the Ocean Color Instrument (OCI) and two multi-angle...

• Unmanned Aerial Vehicles for High-Throughput Phenotyping and Agronomic Research

  Authors:Yeyin Shi, J. Alex Thomasson, Seth C. Murray, N. Ace Pugh, William L. Rooney, Sanaz Shafian, et al.From:PLoS ONE (Vol. 11, Issue 7) Peer-Reviewed

  July 29, 201610,643 words Report 1490LAdvances in automation and data science have led agriculturists to seek real-time, high-quality, high-volume crop data to accelerate crop improvement through breeding and to optimize agronomic practices. Breeders have...

• The use of stem cells in burn wound healing: a review

  Authors:Fadi Ghieh, Rosalyn Jurjus, Amir Ibrahim, Alice Gerges Geagea, Hisham Daouk, Bassel El Baba, et al.From:BioMed Research InternationalPeer-Reviewed

  Annual 20158,641 words Report 1470LBurn wound healing involves a series of complex processes which are subject to intensive investigations to improve the outcomes, in particular, the healing time and the quality of the scar. Burn injuries, especially...

• Estimating particle composition and size distribution from polarized water-leaving radiance

  Authors:Alberto Tonizzo, Alex Gilerson, Tristan Harmel, Amir Ibrahim, Jacek Chowdhary, Barry Gross, et al.From:Applied Optics (Vol. 50, Issue 25) Peer-Reviewed

  Sept. 1, 2011144 words Author abstract, Rep...

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• Ebola

  Authors:Amir Ibrahim and Todd C. LeeFrom:CMAJ: Canadian Medical Association Journal (Vol. 186, Issue 15) Peer-Reviewed

  Oct. 21, 2014484 words Disease/Disorder ove... 1420LEbolavirus is a filovirus that has caused sporadic outbreaks of disease; the current outbreak is the largest recorded The virus's natural reservoir is thought to be bats. The first cases in the current outbreak were...

• Spontaneous Neutrophil Migration Patterns during Sepsis after Major Burns

  Authors:Caroline N. Jones, Molly Moore, Laurie Dimisko, Andrew Alexander, Amir Ibrahim, Bryan A. Hassell, et al.From:PLoS ONE (Vol. 9, Issue 12) Peer-Reviewed

  Dec. 9, 20146,816 words Article 1620LFinely tuned to respond quickly to infections, neutrophils have amazing abilities to migrate fast and efficiently towards sites of infection and inflammation. Although neutrophils ability to migrate is perturbed in...

• Diallel analysis of wheat streak mosaic virus resistance in winter wheat

  Authors:Frederic Hakizimana, Amir M.H. Ibrahim, Marie A.C. Langham, Scott D. Haley, and Jackie C. RuddFrom:Crop Science (Vol. 44, Issue 1) Peer-Reviewed

  January-February 20042,969 words Article Wheat streak mosaic virus (WSMV) (Family: Potyviridae; Genus: Tritimovirus), disseminated naturally by the wheat curl mite (Aceria tosichella Keifer), is an important disease of wheat (Triticum aestivam L. em Thell.)...

• Molecular mapping of stripe rust resistance in hard red winter wheat TAM 111 adapted to the U.S. high plains

  Authors:Bhoja R. Basnet, Amir M.H. Ibrahim, Xianming Chen, Ravi P. Singh, Esten R. Mason, Robert L. Bowden, et al.From:Crop Science (Vol. 54, Issue 4) Peer-Reviewed

  July-August 2014273 words Author abstract

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• Heritability of Heat Tolerance in Winter and Spring Wheat

  Authors:Amir M. H. Ibrahim and James S. QuickFrom:Crop Science (Vol. 41, Issue 5) Peer-Reviewed

  Sept. 20013,602 words Article Cell membranes are the site for many biological activities of the plant and play a key role in heat-induced damage to wheat (Triticum aestivum L.). This study evaluated the genetic variability of wheat using two assays...

• Mapping of quantitative trait loci for grain yield and its components in a US popular winter wheat TAM 111 using 90K SNPs

  Authors:Silvano O. Assanga, Maria Fuentealba, Guorong Zhang, ChorTee Tan, Smit Dhakal, Jackie C. Rudd, et al.From:PLoS ONE (Vol. 12, Issue 12) Peer-Reviewed

  Dec. 21, 20179,836 words Article 1490LStable quantitative trait loci (QTL) are important for deployment in marker assisted selection in wheat (Triticum aestivum L.) and other crops. We reported QTL discovery in wheat using a population of 217 recombinant...

• Benthic effects on the polarization of light in shallow waters

  Authors:Alexander A. Gilerson, Jan Stepinski, Amir I. Ibrahim, Yu You, James M. Sullivan, Michael S. Twardowski, et al.From:Applied Optics (Vol. 52, Issue 36) Peer-Reviewed

  Dec. 20, 2013242 words Author abstract, Rep...

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