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    Academic Journals

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• Transgenerational plasticity of dispersal-related traits in a ciliate: genotype-dependency and fitness consequences.

  Authors:Hugo Cayuela, Staffan Jacob, Nicolas Schtickzelle, Rik Verdonck, Hervé Philippe, Martin Laporte, et al.From:Oikos (Vol. 2022, Issue 3) Peer-Reviewed

  Mar. 2022212 words Brief article

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• Decontamination, pooling and dereplication of the 678 samples of the Marine Microbial Eukaryote Transcriptome Sequencing Project.

  Authors:Mick Van Vlierberghe, Arnaud Di Franco, Hervé Philippe, and Denis BaurainFrom:BMC Research Notes (Vol. 14, Issue 1) Peer-Reviewed

  Aug. 9, 20211,551 words Report 1550LObjectives Complex algae are photosynthetic organisms resulting from eukaryote-to-eukaryote endosymbiotic-like interactions. Yet the specific lineages and mechanisms are still under debate. That is why large scale...

• Acoel Flatworms Are Not Platyhelminthes: Evidence from Phylogenomics

  Authors:Herve Philippe, Henner Brinkmann, Pedro Martinez, Marta Riutort, and Jaume BagunaFrom:PLoS ONE (Vol. 2, Issue 8) Peer-Reviewed

  Aug. 8, 20074,257 words Article 1420LAcoel flatworms are small marine worms traditionally considered to belong to the phylum Platyhelminthes. However, molecular phylogenetic analyses suggest that acoels are not members of Platyhelminthes, but are rather...

• A simple and robust statistical test for detecting the presence of Recombination

  Authors:Trevor C. Bruen, Herve Philippe, and David BryantFrom:Genetics (Vol. 172, Issue 4) Peer-Reviewed

  Apr. 2006194 words Author abstract 60L

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• Genomic insights into the evolutionary origin of Myxozoa within Cnidaria

  Authors:E. Sally Chang, Moran Neuhof, Nimrod D. Rubinstein, Arik Diamant, Herve Philippe, Dorothee Huchon, et al.From:Proceedings of the National Academy of Sciences of the United States (Vol. 112, Issue 48) Peer-Reviewed

  Dec. 1, 20156,274 words Report 1470L

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• Tunicates and not cephalochordates are the closest living relatives of vertebrates

  Authors:Frederic Delsuc, Henner Brinkmann, Daniel Chourrout, and Herve PhilippeFrom:Nature (Vol. 439, Issue 7079) Peer-Reviewed

  Feb. 23, 20063,615 words Article 1520LAuthor(s): Frédéric Delsuc [1, 3]; Henner Brinkmann [1]; Daniel Chourrout [2]; Hervé Philippe (corresponding author) [1] Tunicates or urochordates (appendicularians, salps and sea squirts), cephalochordates...

• The last universal common ancestor (LUCA), simple or complex?

  Authors:Patrick Forterre and Herve PhilippeFrom:The Biological Bulletin (Vol. 196, Issue 3) Peer-Reviewed

  June 19992,873 words Article Research was conducted to examine the problem of the Last Universal Common Ancestor (LUCA) and to reconsider all data supporting the bacterial rooting of the tree of life. A new paradigm shows that Archaea are the sister...

• Reply to Halanych et al.: ctenophore misplacement is corroborated by independent datasets

  Authors:Davide Pisani, Walker Pet, Martin Dohrmann, Roberto Feuda, Omar Rota-Stabelli, Herve Philippe, et al.From:Proceedings of the National Academy of Sciences of the United States (Vol. 113, Issue 8) Peer-Reviewed

  Feb. 23, 2016853 words Letter to the editor 1480L

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• Bayesian comparisons of codon substitution models

  Authors:Nicolas Rodrigue, Nicolas Lartillot, and Herve PhilippeFrom:Genetics (Vol. 180, Issue 3) Peer-Reviewed

  Nov. 2008196 words Author abstract, Cli...

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• MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda

  Authors:Lahcen I. Campbell, Omar Rota-Stabelli, Gregory D. Edgecombe, Trevor Marchioro, Stuart J. Longhorn, Maximilian J. Telford, et al.From:Proceedings of the National Academy of Sciences of the United States (Vol. 108, Issue 38) Peer-Reviewed

  Sept. 20, 2011224 words Author abstract, Rep...

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• Broadly sampled orthologous groups of eukaryotic proteins for the phylogenetic study of plastid-bearing lineages.

  Authors:Mick Van Vlierberghe, Hervé Philippe, and Denis BaurainFrom:BMC Research Notes (Vol. 14, Issue 1) Peer-Reviewed

  Apr. 17, 20211,363 words Report 1500LObjectives Identifying orthology relationships among sequences is essential to understand evolution, diversity of life and ancestry among organisms. To build alignments of orthologous sequences, phylogenomic pipelines...

• Buddenbrockia is a cnidarian worm

  Authors:Eva Jimenez-Guri, Herve Philippe, Beth Okamura, and Peter W.H. HollandFrom:Science (Vol. 317, Issue 5834) Peer-Reviewed

  July 6, 200797 words Author abstract

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• A cnidarian parasite of salmon (Myxozoa: Henneguya) lacks a mitochondrial genome.

  Authors:Dayana Yahalomi, Stephen D. Atkinson, Moran Neuhof, E. Sally Chang, Herve Philippe, Paulyn Cartwright, et al.From:Proceedings of the National Academy of Sciences of the United States (Vol. 117, Issue 0.1) Peer-Reviewed

  Mar. 10, 20205,664 words Article 1400L

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• Presence of a mitochondrial-type 70-kDa heat shock protein in Trichomonas vaginalis suggests a very early mitochondrial endosymbiosis in eukaryotes

  Authors:Agnes Germot, Herve Philippe, and Herve Le GuyaderFrom:Proceedings of the National Academy of Sciences of the United States (Vol. 93, Issue 25) Peer-Reviewed

  Dec. 10, 1996159 words Article

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• Human myosin VIIA responsible for the Usher 1B syndrome: a predicted membrane-associated motor protein expressed in developing sensory epithelia

  Authors:Dominique Weil, Gallia Levy, Iman Sahly, Fabienne Levi-Acobas, Stephane Blanchard, Aziz El-Amraoui, et al.From:Proceedings of the National Academy of Sciences of the United States (Vol. 93, Issue 8) Peer-Reviewed

  Apr. 16, 1996165 words Article

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• Phylogenomics

  Authors:Herve Philippe, Frederic Delsuc, Henner Brinkmann, and Nicolas LartillotFrom:Annual Review of Ecology, Evolution and Systematics (Vol. 36) Peer-Reviewed

  Annual 200551 words Article

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• The origin of red algae and the evolution of chloroplasts

  Authors:David Moreira, Herve Le Guyader, and Herve PhilippeFrom:Nature (Vol. 405, Issue 6782) Peer-Reviewed

  May 4, 20003,116 words Article Author(s): David Moreira (corresponding author) [1, 2]; Hervé Le Guyader [1]; Hervé Philippe [1] Chloroplast structure and genome analyses support the hypothesis that three groups of organisms originated from the...

• Where is the root of the universal tree of life?

  Authors:Patrick Forterre and Herve PhilippeFrom:BioEssays (Vol. 21, Issue 10) Peer-Reviewed

  Oct. 1999140 words Article

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• Phylogeny: A non-hyperthermophilic ancestor for Bacteria

  Authors:Celine Brochier and Herve PhilippeFrom:Nature (Vol. 417, Issue 6886) Peer-Reviewed

  May 16, 2002936 words Article Author(s): Céline Brochier; Hervé Philippe (corresponding author) The first phyla that emerge in the tree of life based on ribosomal RNA (rRNA) sequences are hyperthermophilic, which led to the hypothesis that the...

• Smr: a bacterial and eukaryotic homologue of the C-terminal region of the MutS2 family

  Authors:David Moreira and Herve PhilippeFrom:Trends in Biochemical Sciences (Vol. 24, Issue 8) Peer-Reviewed

  Aug. 199976 words Article

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