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    Academic Journals

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• Identifying transcript 5'capped ends in Plasmodium falciparum.

  Authors:Philip J. Shaw, Jittima Piriyapongsa, Pavita Kaewprommal, Chayaphat Wongsombat, Chadapohn Chaosrikul, Krirkwit Teeravajanadet, et al.From:PeerJ (Vol. 9) Peer-Reviewed

  Aug. 25, 202115,372 words Article 1510LBackground The genome of the human malaria parasite Plasmodium falciparum is poorly annotated, in particular, the 5'capped ends of its mRNA transcripts. New approaches are needed to fully catalog P. falciparum...

• ToNER: A tool for identifying nucleotide enrichment signals in feature-enriched RNA-seq data

  Authors:Yuttachon Promworn, Pavita Kaewprommal, Philip J. Shaw, Apichart Intarapanich, Sissades Tongsima, and Jittima PiriyapongsaFrom:PLoS ONE (Vol. 12, Issue 5) Peer-Reviewed

  May 25, 20178,143 words Report 1510LBackground Biochemical methods are available for enriching 5' ends of RNAs in prokaryotes, which are employed in the differential RNA-seq (dRNA-seq) and the more recent Cappable-seq protocols. Computational methods...

• Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing

  Authors:Jittima Piriyapongsa, Pavita Kaewprommal, Sirintra Vaiwsri, Songtham Anuntakarun, Warodom Wirojsirasak, Prapat Punpee, et al.From:PeerJ (Vol. 6) Peer-Reviewed

  Oct. 30, 20188,458 words Report 1610LBackground Sugarcane is an important global food crop and energy resource. To facilitate the sugarcane improvement program, genome and gene information are important for studying traits at the molecular level. Most...