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    Academic Journals

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• Next-generation sequencing for lung cancer

  Authors:Kehua Wu, R. Stephanie Huang, Larry House, and William Chi ChoFrom:Future Oncology (Vol. 9, Issue 9) Peer-Reviewed

  Sept. 20138,571 words Report 1340LAuthor(s): Kehua Wu 1 , R Stephanie Huang 1 , Larry House 1 , William Chi Cho [*] 2 Keywords : * lung cancer; next-generation sequencing; whole-exome sequencing; whole-genome sequencing; whole-transcriptome...

• Novel NAT2 haplotyping using allele-specific sequencing

  Authors:Seong-Ho Kang, Geon Park, Sook Jin Jang, and Dae-Soo MoonFrom:Pharmacogenomics (Vol. 15, Issue 8) Peer-Reviewed

  June 20143,489 words Report 1390LAuthor(s): Seong-Ho Kang aff1 , Geon Park [*] aff1 , Sook Jin Jang aff1 aff2 , Dae-Soo Moon aff1 Keywords: allele-specific sequencing; haplotyping; NAT2 Background NAT2 activates and deactivates nitrogenous...

• Functions of noncoding sequences in mammalian genomes

  Authors:L.I. Patrushev and T.F. KovalenkoFrom:Biochemistry (Moscow) (Vol. 79, Issue 13) Peer-Reviewed

  Dec. 15, 201423,762 words Report 1430LMost of the mammalian genome consists of nucleotide sequences not coding for proteins. Exons of genes make up only 3% of the human genome, while the significance of most other sequences remains unknown. Recent genome...

• Next-generation sequencing-based testing for cancer mutational landscape diversity: clinical implications?

  Authors:Christos Katsios, Costas Papaloukas, Margaret Tzaphlidou, and Dimitrios H RoukosFrom:Expert Review of Molecular Diagnostics (Vol. 12, Issue 7) Peer-Reviewed

  Sept. 20122,398 words Report 1670LAuthor(s): Christos Katsios 1 , Costas Papaloukas 2 , Margaret Tzaphlidou 3 , Dimitrios H Roukos 4 Keywords : cancer genome; heterogeneity; mutations; NGS-WES; personalized diagnostics Although tumor cell...

• Maternal genotypes as predictors of offspring mental health: the next frontier of genomic medicine?

  Authors:Jan Haavik, Anne Halmoy, Tor-Arne Hegvik, and Stefan JohanssonFrom:Future Neurology (Vol. 6, Issue 6) Peer-Reviewed

  Nov. 20119,090 words Report 1600LAuthor(s): Jan Haavik [[dagger]] 5 , Anne Halmøy 1 2 3 , Tor-Arne Hegvik 1 3 , Stefan Johansson 1 3 4 Keywords * ADHD; attention deficit-hyperactivity disorder; embryo; gene-environment interaction; genome;...

• Heart to heart: challenges and perspectives for genetic research in congenital heart disease

  Authors:Gregor Andelfinger and Paul KhairyFrom:Expert Review of Cardiovascular Therapy (Vol. 9, Issue 6) Peer-Reviewed

  June 20112,320 words Clinical report, Edi... 1490LAuthor(s): Gregor Andelfinger [[dagger]â ] 1 , Paul Khairy 2 Keywords : congenital heart disease; genetics; personalized medicine; sequencing The advent of novel and innovative genetic analysis techniques in...

• Bulletin Board

  From:Future Oncology (Vol. 6, Issue 10) Peer-Reviewed

  Oct. 2010414 words Report 1450LDoctors use clues from genome sequencing of rare tongue tumor to personalize treatment regimen. Doctors at the BC Cancer Agency Genome Sciences Centre (British Columbia, Canada) used massively parallel sequencing to...

• The Development of a Genome Wide SNP Set for the Barnacle Goose Branta leucopsis

  Authors:Rudy M. Jonker, Qiong Zhang, Pim Van Hooft, Maarten J. J. E. Loonen, Henk P. Van der Jeugd, Richard P. M. A. Crooijmans, et al.From:PLoS ONE (Vol. 7, Issue 7) Peer-Reviewed

  July 10, 20124,559 words Article 1490LAuthor(s): Rudy M. Jonker 1 , 2 , * , Qiong Zhang 1 , 3 , Pim Van Hooft 1 , Maarten J. J. E. Loonen 4 , Henk P. Van der Jeugd 5 , Richard P. M. A. Crooijmans 6 , Martien A. M. Groenen 6 , Herbert H. T. Prins 1 , Robert...

• Pyrosequencing of Haliotis diversicolor Transcriptomes: Insights into Early Developmental Molluscan Gene Expression

  Authors:Zi-Xia Huang, Zhi-Sen Chen, Cai-Huan Ke, Jing Zhao, Wei-Wei You, Jie Zhang, et al.From:PLoS ONE (Vol. 7, Issue 12) Peer-Reviewed

  Dec. 7, 20127,863 words Article 1490LAuthor(s): Zi-Xia Huang 1 , 2 , Zhi-Sen Chen 1 , 2 , Cai-Huan Ke 1 , 2 , Jing Zhao 2 , Wei-Wei You 2 , Jie Zhang 2 , Wei-Ting Dong 2 , Jun Chen 1 , 2 , * Introduction The early development of benthic mollusks...

• Serum Starvation Induces DRAM Expression in Liver Cancer Cells via Histone Modifications within Its Promoter Locus

  Authors:Peihua Ni, Hong Xu, Changqiang Chen, Jiayi Wang, Xiangfan Liu, Yiqun Hu, et al.From:PLoS ONE (Vol. 7, Issue 12) Peer-Reviewed

  Dec. 12, 20124,926 words Article 1470LAuthor(s): Peihua Ni 1 , 2 , Hong Xu 3 , Changqiang Chen 2 , Jiayi Wang 2 , Xiangfan Liu 2 , Yiqun Hu 2 , Qishi Fan 2 , Zhaoyuan Hou 3 , * , Yang Lu 1 , * Introduction Inactivation of cell-death pathways is a...

• Prevalence and Genetic Characterizations of Cryptosporidium spp. in Pre-Weaned and Post-Weaned Piglets in Heilongjiang Province, China

  Authors:Weizhe Zhang, Fengkun Yang, Aiqin Liu, Rongjun Wang, Longxian Zhang, Yujuan Shen, et al.From:PLoS ONE (Vol. 8, Issue 7) Peer-Reviewed

  July 3, 20135,521 words Article 1500LAuthor(s): Weizhe Zhang 1, Fengkun Yang 1, Aiqin Liu 1,*, Rongjun Wang 2, Longxian Zhang 2, Yujuan Shen 3, Jianping Cao 3, Hong Ling 1,* Introduction Cryptosporidium spp. are common intestinal protozoa occurring...

• A Force-Based, Parallel Assay for the Quantification of Protein-DNA Interactions

  Authors:Katja Limmer, Diana A. Pippig, Daniela Aschenbrenner, and Hermann E. GaubFrom:PLoS ONE (Vol. 9, Issue 2) Peer-Reviewed

  Feb. 27, 20144,686 words Article 1520LAuthor(s): Katja Limmer 1,2, Diana A. Pippig 1, Daniela Aschenbrenner 1, Hermann E. Gaub 1,* Introduction The sequence-specific interaction of certain proteins with the genomic DNA is prerequisite for the complex...

• Bacterial Delivery of TALEN Proteins for Human Genome Editing

  Authors:Jingyue Jia, Yongxin Jin, Ting Bian, Donghai Wu, Lijun Yang, Naohiro Terada, et al.From:PLoS ONE (Vol. 9, Issue 3) Peer-Reviewed

  Mar. 11, 20145,805 words Article 1620LAuthor(s): Jingyue Jia 1, Yongxin Jin 1, Ting Bian 1, Donghai Wu 2, Lijun Yang 3, Naohiro Terada 3, Weihui Wu 1,*, Shouguang Jin 1,4,* Introduction Transcription activator-like (TAL) effectors were first...

• A New Exhaustive Method and Strategy for Finding Motifs in ChIP-Enriched Regions

  Authors:Caiyan Jia, Matthew B. Carson, Yang Wang, Youfang Lin, and Hui LuFrom:PLoS ONE (Vol. 9, Issue 1) Peer-Reviewed

  Jan. 24, 20149,940 words Article 1650LAuthor(s): Caiyan Jia 1,2,*, Matthew B. Carson 3,4, Yang Wang 1, Youfang Lin 1, Hui Lu 2,5,* Introduction Protein-DNA interactions play key roles in several cellular processes and functions including DNA...

• Mitochondrial Sequence Variation in African-American Primary Open-Angle Glaucoma Patients

  From:PLoS ONE (Vol. 8, Issue 10) Peer-Reviewed

  Oct. 1, 20136,257 words Article 1540LIntroduction Primary open-angle glaucoma (POAG) is defined as a spectrum of diseases causing vision loss as a result of progressive and irreversible retinal ganglion cell damage, optic nerve degeneration and...

• The Detection and Sequencing of a Broad-Host-Range Conjugative IncP-1[beta] Plasmid in an Epidemic Strain of Mycobacterium abscessus subsp. bolletii

  Authors:Sylvia Cardoso Leao, Cristianne Kayoko Matsumoto, Adriana Carneiro, Rommel Thiago Ramos, Christiane Lourenco Nogueira, James Daltro Lima Junior, et al.From:PLoS ONE (Vol. 8, Issue 4) Peer-Reviewed

  Apr. 2, 20139,462 words Report 1480LAuthor(s): Sylvia Cardoso Leão 1,*, Cristianne Kayoko Matsumoto 1, Adriana Carneiro 2, Rommel Thiago Ramos 2, Christiane Lourenço Nogueira 1, James Daltro Lima Junior 1, Karla Valéria Lima 3, Maria Luiza Lopes 3,...

• Complete Genome and Molecular Epidemiological Data Infer the Maintenance of Rabies among Kudu (Tragelaphus strepsiceros) in Namibia

  Authors:Terence P. Scott, Melina Fischer, Siegfried Khaiseb, Conrad Freuling, Dirk Hoper, Bernd Hoffmann, et al.From:PLoS ONE (Vol. 8, Issue 3) Peer-Reviewed

  Mar. 20, 20134,343 words Article 1550LAuthor(s): Terence P. Scott 1 , Melina Fischer 2 , Siegfried Khaiseb 3 , Conrad Freuling 2 , Dirk Höper 2 , Bernd Hoffmann 2 , Wanda Markotter 1 , Thomas Müller 2 , Louis H. Nel 1 , * Introduction Rabies virus...

• Promoter Hypermethylation of ARID1A Gene Is Responsible for Its Low mRNA Expression in Many Invasive Breast Cancers

  Authors:Xianyu Zhang, Qian Sun, Ming Shan, Ming Niu, Tong Liu, Bingshu Xia, et al.From:PLoS ONE (Vol. 8, Issue 1) Peer-Reviewed

  Jan. 21, 20133,758 words Article 1350LAuthor(s): Xianyu Zhang 1 , Qian Sun 1 , Ming Shan 1 , Ming Niu 1 , Tong Liu 1 , Bingshu Xia 1 , Xiaoshuan Liang 1 , Wei Wei 1 , Shanshan Sun 1 , Youxue Zhang 1 , Xiaolong Sean Liu 2 , Qingbin Song 3 , Yanmei Yang 4 ,...

• Genome Analysis of Staphylococcus aureus ST291, a Double Locus Variant of ST398, Reveals a Distinct Genetic Lineage

  Authors:Marc Stegger, Maliha Aziz, Tomasz Chroboczek, Lance B. Price, Troels Ronco, Kristoffer Kiil, et al.From:PLoS ONE (Vol. 8, Issue 5) Peer-Reviewed

  May 21, 20132,916 words Article 1650LAuthor(s): Marc Stegger 1,2,*, Maliha Aziz 2, Tomasz Chroboczek 4, Lance B. Price 2,3, Troels Ronco 1, Kristoffer Kiil 1, Robert L. Skov 1, Frederic Laurent 4, Paal S. Andersen 1,2 Introduction Since its...

• Transcriptome and Expression Profile Analysis of Highly Resistant and Susceptible Banana Roots Challenged with Fusarium oxysporum f. sp. cubense Tropical Race 4

  Authors:Ting-Ting Bai, Wan-Bin Xie, Ping-Ping Zhou, Zi-Lin Wu, Wen-Chao Xiao, Ling Zhou, et al.From:PLoS ONE (Vol. 8, Issue 9) Peer-Reviewed

  Sept. 23, 20138,847 words Article 1390LAuthor(s): Ting-Ting Bai 1,2, Wan-Bin Xie 1,2, Ping-Ping Zhou 1,2, Zi-Lin Wu 1,2, Wen-Chao Xiao 1,2, Ling Zhou 1,2, Jie Sun 1,2, Xiao-Lei Ruan 2, Hua-Ping Li 1,2,* Introduction Musa spp. (bananas and plantains) is...