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    Academic Journals

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• Select Gene expression in the squid giant axon: neurotransmitter modulation of RNA transfer from periaxonal glia to the axon

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  Gene expression in the squid giant axon: neurotransmitter modulation of RNA transfer from periaxonal glia to the axon

  Authors:Antonio Giuditta, Maria Eyman, and Barry B. KaplanFrom:The Biological Bulletin (Vol. 203, Issue 2) Peer-Reviewed

  Oct. 2002911 words Article The presence of RNA in axons has been known for nearly 40 years (1). In large model axons, such as the goldfish Mauthner axon and the squid giant axon, axoplasmic RNA includes the main cytoplasmic species, that is,...
• Select A plausible role for the presence of internal Shine-Dalgarno sites

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  A plausible role for the presence of internal Shine-Dalgarno sites

  Author:Lalit PonnalaFrom:Bioinformatics and Biology InsightsPeer-Reviewed

  June 28, 20102,508 words Report 1620LThe presence of nucleotide hybridization between the 3' end of 16S rRNA and mRNA sequence upstream of the start codon is well known in bacteria. In this paper, we detect the presence of such hybridization sites inside...
• Select RNA decay: The exosome TRAMPs on viral RNA

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  RNA decay: The exosome TRAMPs on viral RNA

  Author:Eytan ZlotorynskiFrom:Nature Reviews Molecular Cell Biology (Vol. 17, Issue 9) Peer-Reviewed

  Sept. 2016167 words Author abstract, Bri... 1670LAuthor(s): Eytan Zlotorynski Performing RNAi screens for factors that restrict several RNA viruses in fruit flies, Molleston et al . discovered that depletion of the 3' to 5' exonucleases dRrp6 or dDis3, which are...
• Select The 5' Spreading of Small RNAs in Dictyostelium discoideum Depends on the RNA-Dependent RNA Polymerase RrpC and on the Dicer-Related Nuclease DrnB

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  The 5' Spreading of Small RNAs in Dictyostelium discoideum Depends on the RNA-Dependent RNA Polymerase RrpC and on the Dicer-Related Nuclease DrnB

  Authors:Stephan Wiegand and Christian HammannFrom:PLoS ONE (Vol. 8, Issue 5) Peer-Reviewed

  May 20, 20136,922 words Article 1560LAuthor(s): Stephan Wiegand, Christian Hammann * Introduction Double stranded RNA is the central nucleic acid entity in the gene regulatory mechanism RNA interference (RNAi) [1] that acts in many eukaryotes....
• Select Rice stripe virus infection alters mRNA levels of sphingolipid-metabolizing enzymes and sphingolipids content in Laodelphax striatellus

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  Rice stripe virus infection alters mRNA levels of sphingolipid-metabolizing enzymes and sphingolipids content in Laodelphax striatellus

  Authors:Wen-Juan Jiao, Fei-Qiang Li, Yue-Liang Bai, Xiao-Xiao Shi, Mu-Fei Zhu, Min-Jing Zhang, et al.From:Journal of Insect Science (Vol. 17, Issue 1) Peer-Reviewed

  Jan. 20174,700 words Report 1530LSphingolipids and their metabolites have been implicated in viral infection and replication in mammal cells but how their metabolizing enzymes in the host are regulated by viruses remains largely unknown. Here we report...
• Select New Molecular Science Data Have Been Reported by Researchers at Polish Academy of Sciences (Reprogramming mRNA Expression in Response to Defect in RNA Polymerase III Assembly in the Yeast * * Saccharomyces cerevisiae* *).

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  New Molecular Science Data Have Been Reported by Researchers at Polish Academy of Sciences (Reprogramming mRNA Expression in Response to Defect in RNA Polymerase III Assembly in the Yeast * * Saccharomyces cerevisiae* *).

  From:Obesity, Fitness & Wellness Week

  Aug. 14, 2021503 words Article 1380L2021 AUG 14 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- New study results on molecular science have been published. According to news reporting from Warsaw, Poland, by NewsRx...
• Select Data on Klebsiella Detailed by Researchers at Huazhong University of Science and Technology (Klebsiella Phage KP34 RNA Polymerase and Its Use in RNA Synthesis).

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  Data on Klebsiella Detailed by Researchers at Huazhong University of Science and Technology (Klebsiella Phage KP34 RNA Polymerase and Its Use in RNA Synthesis).

  From:Obesity, Fitness & Wellness Week

  Nov. 23, 2019392 words Report, Brief articl... 1290L2019 NOV 23 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Research findings on klebsiella are discussed in a new report. According to news originating from Wuhan, People's...
• Select Messenger RNA transport and HIV rev regulation

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  Messenger RNA transport and HIV rev regulation

  Authors:David D. Chang and Phillip A. SharpFrom:Science (Vol. 249, Issue 4969) Peer-Reviewed

  Aug. 10, 19902,008 words Article The mechanism of transport of messenger ribose nucleic acid (mRNA) molecules from the nucleus of the cell where they are synthesized from genes, to the cytoplasm of the cell, where proteins are synthesized from them, is...
• Select Understanding biases in ribosome profiling experiments reveals signatures of translation dynamics in yeast

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  Understanding biases in ribosome profiling experiments reveals signatures of translation dynamics in yeast

  Authors:Jeffrey A. Hussmann, Stephanie Patchett, Arlen Johnson, Sara Sawyer, and William H. PressFrom:PLoS Genetics (Vol. 11, Issue 12) Peer-Reviewed

  Dec. 201510,530 words Report 1630LRibosome profiling produces snapshots of the locations of actively translating ribosomes on messenger RNAs. These snapshots can be used to make inferences about translation dynamics. Recent ribosome profiling studies in...
• Select Contribution of natural antisense transcription to an endogenous siRNA signature in human cells

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  Contribution of natural antisense transcription to an endogenous siRNA signature in human cells

  Authors:Andreas Werner, Simon Cockell, Jane Falconer, Mark Carlile, Sammer Alnumeir, and John RobinsonFrom:BMC Genomics (Vol. 15, Issue 1) Peer-Reviewed

  Jan. 13, 20146,579 words Article 1360LAuthor(s): Andreas Werner1 , Simon Cockell2 , Jane Falconer3 , Mark Carlile4 , Sammer Alnumeir1 and John Robinson5 Background The full nature of the human transcriptome is taking shape thanks to highly efficient...
• Select Mitochondrial Polyadenylation Is a One-Step Process Required for mRNA Integrity and tRNA Maturation

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  Mitochondrial Polyadenylation Is a One-Step Process Required for mRNA Integrity and tRNA Maturation

  Authors:Ana Bratic, Paula Clemente, Javier Calvo-Garrido, Camilla Maffezzini, Andrea Felser, Rolf Wibom, et al.From:PLoS Genetics (Vol. 12, Issue 5) Peer-Reviewed

  May 13, 20168,987 words Report 1540LPolyadenylation has well characterised roles in RNA turnover and translation in a variety of biological systems. While polyadenylation on mitochondrial transcripts has been suggested to be a two-step process required to...
• Select Modification of [tRNA.sup.Lys.sub.UUU] by Elongator is essential for efficient translation of stress mRNAs

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  Modification of [tRNA.sup.Lys.sub.UUU] by Elongator is essential for efficient translation of stress mRNAs

  Authors:Jorge Fernandez-Vazquez, Itzel Vargas-Perez, Miriam Sanso, Karin Buhne, Merce Carmona, Esther Paulo, et al.From:PLoS Genetics (Vol. 9, Issue 7) Peer-Reviewed

  July 20138,238 words Report 1570LThe Elongator complex, including the histone acetyl transferase Sin3/Elp3, was isolated as an RNA polymerase II- interacting complex, and cells deficient in Elongator subunits display transcriptional defects. However,...
• Select Poxvirus transcription

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  Poxvirus transcription

  Authors:Steven S Broyles and Bruce A KnutsonFrom:Future Virology (Vol. 5, Issue 5)

  Sept. 20108,149 words Article Author(s): Steven S Broyles [[dagger]] 2 , Bruce A Knutson 1 Keywords: Keywords * RNA polymerase; TATA binding protein; transcription factor; vaccinia virus Poxviruses are an extensive family of large DNA...
• Select Dynamic pathways of--1 translational frameshifting

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  Dynamic pathways of--1 translational frameshifting

  Authors:Jin Chen, Alexey Petrov, Magnus Johansson, Albert Tsai, Sean E. O'Leary, and Joseph D. PuglisiFrom:Nature (Vol. 512, Issue 7514) Peer-Reviewed

  Aug. 21, 20145,504 words Report 1550LSpontaneous changes in the reading frame of translation are rare (frequency of [10.sup.-3] to [10.sup.-4] per codon) (1), but can be induced by specific features in the messenger RNA (mRNA). In the presence of mRNA...
• Select RNA-Seq analysis reveals new gene models and alternative splicing in the fungal pathogen Fusarium graminearum

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  RNA-Seq analysis reveals new gene models and alternative splicing in the fungal pathogen Fusarium graminearum

  Authors:Chunzhao Zhao, Cees Waalwijk, Pierre J G M de Wit, Dingzhong Tang, and Theo van der LeeFrom:BMC Genomics (Vol. 14, Issue 1) Peer-Reviewed

  Jan. 16, 20139,342 words Report 1450LAuthor(s): Chunzhao Zhao1,2,3,4 , Cees Waalwijk1,2 , Pierre J G M de Wit2,5 , Dingzhong Tang3 and Theo van der Lee1,2 Background Fusarium graminearum is an ascomycete that can cause diseases in a variety of...
• Select Investigators at Harvard University School of Medicine Publish New Data on Vesicular Stomatitis

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  Investigators at Harvard University School of Medicine Publish New Data on Vesicular Stomatitis

  From:Obesity, Fitness & Wellness Week

  June 11, 2011394 words Article 1510LData detailed in "Molecular architecture of the vesicular stomatitis virus RNA polymerase" have been presented. According to a study from Boston, United States, "Nonsegmented negative-strand (NNS) RNA viruses initiate...
• Select The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing

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  The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing

  Authors:Yehuda Brody, Noa Neufeld, Nicole Bieberstein, Sebastien Z. Causse, Eva-Maria Bohnlein, Karla M. Neugebauer, et al.From:PLoS Biology (Vol. 9, Issue 1) Peer-Reviewed

  Jan. 201112,589 words Report 1400LNA processing events that take place on the transcribed pre-mRNA include capping, splicing, editing, 3' processing, and polyadenylation. Most of these processes occur co-transcriptionally while the RNA polymerase II...
• Select Findings from MRC Laboratory of Molecular Biology in the Area of RNA Nucleotidyltransferases Described (DDX49 is an RNA helicase that affects translation by regulating mRNA export and the levels of pre-ribosomal RNA)

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  Findings from MRC Laboratory of Molecular Biology in the Area of RNA Nucleotidyltransferases Described (DDX49 is an RNA helicase that affects translation by regulating mRNA export and the levels of pre-ribosomal RNA)

  From:Obesity, Fitness & Wellness Week

  Aug. 11, 2018443 words Article 1320L2018 AUG 11 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Investigators discuss new findings in Enzymes and Coenzymes - RNA Nucleotidyltransferases. According to news reporting...
• Select Elevation of plasma tRNA fragments precedes seizures in human epilepsy

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  Elevation of plasma tRNA fragments precedes seizures in human epilepsy

  Authors:Marion C. Hogg, Rana Raoof, Hany El Naggar, Naser Monsefi, Norman Delanty, Donncha F. O'Brien, et al.From:Journal of Clinical Investigation (Vol. 129, Issue 7) Peer-Reviewed

  July 20194,030 words Article 1470LTransfer RNAs (tRNAs) are a major class of noncoding RNA. Stress-induced cleavage of tRNA is highly conserved and results in tRNA fragments. Here, we found that specific tRNA fragments in plasma are associated with...
• Select A conserved mechanism for post-transcriptional gene silencing?

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  A conserved mechanism for post-transcriptional gene silencing?

  Author:Eleanor M MaineFrom:Genome Biology (Vol. 1, Issue 3) Peer-Reviewed

  Sept. 13, 20002,019 words Article 1340LProteins with homology to RNA-directed RNA polymerases function in post-transcriptional gene silencing: in quelling in the fungus Neurospora crassa, RNAi in the nematode Caenorhabditis elegans, and co-suppression in the...