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    Academic Journals

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• Select Micro-RNAs in IVF outcome

  1

  Micro-RNAs in IVF outcome

  Authors:Saeid Ghorbian and Ahmad ZonouziFrom:Indian Journal of Human Genetics (Vol. 19, Issue 2) Peer-Reviewed

  April-June 2013379 words Brief article, Repor... 1560LByline: Saeid. Ghorbian, Ahmad. Zonouzi Sir, The advancement on assisted reproductive technologies increased hope to childbearing in couples of infertile. In vitro fertilization (IVF) is one of these technologies....
• Select Spatial reconstruction of single-cell gene expression data

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  Spatial reconstruction of single-cell gene expression data

  Authors:Rahul Satija, Jeffrey A. Farrell, David Gennert, Alexander F. Schier, and Aviv RegevFrom:Nature Biotechnology (Vol. 33, Issue 5) Peer-Reviewed

  May 201513,951 words Report 1550LSpatial localization is a key determinant of cellular fate and behavior, but methods for spatially resolved, transcriptome-wide gene expression profiling across complex tissues are lacking. RNA staining methods assay...
• Select The DEAH-box Helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot

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  The DEAH-box Helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot

  Authors:Richa Sardana, Xin Liue, Sander Granneman, Jieyi Zhu, Michael Gill, Ophelia Papoulas, et al.From:PLoS Biology (Vol. 13, Issue 2) Peer-Reviewed

  Feb. 201510,241 words Report 1430LIn eukaryotes, the highly conserved U3 small nucleolar RNA (snoRNA) base-pairs to multiple sites in the pre-ribosomal RNA (pre-rRNA) to promote early cleavage and folding events. Binding of the U3 box A region to the...
• Select Region-specific activation of oskar mRNA translation by inhibition of Bruno-mediated repression

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  Region-specific activation of oskar mRNA translation by inhibition of Bruno-mediated repression

  Authors:Goheun Kim, Chin-I Pai, Keiji Sato, Maria D. Person, Akira Nakamura, and Paul M. MacdonaldFrom:PLoS Genetics (Vol. 11, Issue 2) Peer-Reviewed

  Feb. 20159,734 words Report 1370LA complex program of translational repression, mRNA localization, and translational activation ensures that Oskar (Osk) protein accumulates only at the posterior pole of the Drosophila oocyte. Inappropriate expression...
• Select Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation

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  Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation

  Authors:Wencheng Li, Bei You, Mainul Hoque, Dinghai Zheng, Wenting Luo, Zhe Ji, et al.From:PLoS Genetics (Vol. 11, Issue 4) Peer-Reviewed

  Apr. 201512,475 words Report 1510LAlternative cleavage and polyadenylation (APA) results in mRNA isoforms containing different 3' untranslated regions (3'UTRs) and/or coding sequences. How core cleavage/ polyadenylation (C/P) factors regulate APA is not...
• Select Hepatitis C virus RNA replication depends on specific cis- and trans-acting activities of viral nonstructural proteins

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  Hepatitis C virus RNA replication depends on specific cis- and trans-acting activities of viral nonstructural proteins

  Authors:Teymur Kazakov, Feng Yang, Harish N. Ramanathan, Andrew Kohlway, Michael S. Diamond, and Brett D. LindenbachFrom:PLoS Pathogens (Vol. 11, Issue 4) Peer-Reviewed

  Apr. 201512,953 words Report 1440LMany positive-strand RNA viruses encode genes that can function in trans, whereas other genes are required in cis for genome replication. The mechanisms underlying trans- and cis-preferences are not fully understood....
• Select Nicotiana small RNA sequences support a host genome origin of Cucumber Mosaic Virus satellite RNA

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  Nicotiana small RNA sequences support a host genome origin of Cucumber Mosaic Virus satellite RNA

  Authors:Kiran Zahid, Jian-Hua Zhao, Neil A. Smith, Ulrike Schumann, Yuan-Yuan Fang, Elizabeth S. Dennis, et al.From:PLoS Genetics (Vol. 11, Issue 1) Peer-Reviewed

  Jan. 20157,836 words Report 1560LSatellite RNAs (satRNAs) are small noncoding subviral RNA pathogens in plants that depend on helper viruses for replication and spread. Despite many decades of research, the origin of satRNAs remains unknown. In this...
• Select Reprogramming of Yersinia from virulent to persistent mode revealed by complex in vivo RNA-seq analysis

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  Reprogramming of Yersinia from virulent to persistent mode revealed by complex in vivo RNA-seq analysis

  Authors:Kemal Avican, Anna Fahlgren, Mikael Huss, Ann Kathrin Heroven, Michael Beckstette, Petra Dersch, et al.From:PLoS Pathogens (Vol. 11, Issue 1) Peer-Reviewed

  Jan. 201512,043 words Report 1490LWe recently found that Yersinia pseudotuberculosis can be used as a model of persistent bacterial infections. We performed in vivo RNA-seq of bacteria in small cecal tissue biopsies at early and persistent stages of...
• Select Reports from Indian Institute of Science Describe Recent Advances in Glioblastomas (Elucidating the cancer-specific genetic alteration spectrum of glioblastoma derived cell lines from whole exome and RNA sequencing)

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  Reports from Indian Institute of Science Describe Recent Advances in Glioblastomas (Elucidating the cancer-specific genetic alteration spectrum of glioblastoma derived cell lines from whole exome and RNA sequencing)

  From:Obesity, Fitness & Wellness Week

  June 4, 2016353 words Brief article, Repor... 1620L2016 JUN 4 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Fresh data on Oncology are presented in a new report. According to news originating from Bangalore, India, by NewsRx...
• Select Hematopoietic stem cells, hematopoiesis and disease: lessons from the zebrafish model

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  Hematopoietic stem cells, hematopoiesis and disease: lessons from the zebrafish model

  Authors:Corey S Martin, Akemi Moriyama, and Leonard I ZonFrom:Genome Medicine (Vol. 3, Issue 83) Peer-Reviewed

  Dec. 29, 2011 Article 1430L
• Select Studies from University of Edinburgh in the Area of Stem Cell Research Reported (Gene expression variability in mammalian embryonic stem cells using single cell RNA-seq data)

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  Studies from University of Edinburgh in the Area of Stem Cell Research Reported (Gene expression variability in mammalian embryonic stem cells using single cell RNA-seq data)

  From:Obesity, Fitness & Wellness Week

  Sept. 24, 2016372 words Brief article 1530L2016 SEP 24 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- A new study on Stem Cell Research is now available. According to news originating from Midlothian, United Kingdom, by...
• Select Identification of Intermediate-Size Non-Coding RNAs Involved in the UV-Induced DNA Damage Response in C. elegans

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  Identification of Intermediate-Size Non-Coding RNAs Involved in the UV-Induced DNA Damage Response in C. elegans

  Authors:Aqian Li, Guifeng Wei, Yunfei Wang, Ying Zhou, Xian-en Zhang, Lijun Bi, et al.From:PLoS ONE (Vol. 7, Issue 11) Peer-Reviewed

  Nov. 7, 20126,868 words Article 1450LAuthor(s): Aqian Li 1 , 2 , Guifeng Wei 1 , 2 , Yunfei Wang 1 , Ying Zhou 1 , Xian-en Zhang 3 , Lijun Bi 1 , * , Runsheng Chen 1 , * Introduction Genomic integrity is essential for the survival of the individual...
• Select Structure of a spliceosome remodelled for exon ligation

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  Structure of a spliceosome remodelled for exon ligation

  Authors:Sebastian M. Fica, Chris Oubridge, Wojciech P. Galej, Max E. Wilkinson, Xiao-Chen Bai, Andrew J. Newman, et al.From:Nature (Vol. 542, Issue 7641) Peer-Reviewed

  Feb. 16, 20177,410 words Report 1600LAuthor(s): Sebastian M. Fica (corresponding author) [1]; Chris Oubridge [1]; Wojciech P. Galej [1]; Max E. Wilkinson [1]; Xiao-Chen Bai [1]; Andrew J. Newman [1]; Kiyoshi Nagai (corresponding author) [1] The...
• Select Transient Exposure to Low Levels of Insecticide Affects Metabolic Networks of Honeybee Larvae

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  Transient Exposure to Low Levels of Insecticide Affects Metabolic Networks of Honeybee Larvae

  Authors:Kamila Derecka, Martin J. Blythe, Sunir Malla, Diane P. Genereux, Alessandro Guffanti, Paolo Pavan, et al.From:PLoS ONE (Vol. 8, Issue 7) Peer-Reviewed

  July 2, 20138,170 words Report 1410LAuthor(s): Kamila Derecka 1, Martin J. Blythe 2, Sunir Malla 2, Diane P. Genereux 3, Alessandro Guffanti 4, Paolo Pavan 4, Anna Moles 4, Charles Snart 1, Thomas Ryder 5, Catharine A. Ortori 6, David A. Barrett 6, Eugene...
• Select Simultaneous Transcriptional Profiling of Bacteria and Their Host Cells

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  Simultaneous Transcriptional Profiling of Bacteria and Their Host Cells

  Authors:Michael S. Humphrys, Todd Creasy, Yezhou Sun, Amol C. Shetty, Marcus C. Chibucos, Elliott F. Drabek, et al.From:PLoS ONE (Vol. 8, Issue 12) Peer-Reviewed

  Dec. 4, 201311,570 words Article 1540LAuthor(s): Michael S. Humphrys 1, Todd Creasy 1, Yezhou Sun 1, Amol C. Shetty 1, Marcus C. Chibucos 1,2, Elliott F. Drabek 1, Claire M. Fraser 1,2, Umar Farooq 1, Naomi Sengamalay 1, Sandy Ott 1, Huizhong Shou 2, Patrik...
• Select Sequencing Degraded RNA Addressed by 3' Tag Counting

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  Sequencing Degraded RNA Addressed by 3' Tag Counting

  Authors:Benjamin Sigurgeirsson, Olof Emanuelsson, and Joakim LundebergFrom:PLoS ONE (Vol. 9, Issue 3) Peer-Reviewed

  Mar. 14, 20147,942 words Article 1420LAuthor(s): Benjamín Sigurgeirsson, Olof Emanuelsson, Joakim Lundeberg * Introduction RNA extraction is one of the first steps in gene expression profiling experiments whether the assay is qPCR, microarrays or RNA...
• Select Characterization of pectin lyase and polygalacturonase from novel Bacillus cereus GS-2 isolated from Chittoor and Vellore fruit industrial dump sites by SEM, 16SrRNA sequencing, ion-exchange, SDS and HPLC analysis

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  Characterization of pectin lyase and polygalacturonase from novel Bacillus cereus GS-2 isolated from Chittoor and Vellore fruit industrial dump sites by SEM, 16SrRNA sequencing, ion-exchange, SDS and HPLC analysis

  Authors:G. Praveen Kumar and V. SuneethaFrom:Journal of Pure and Applied Microbiology (Vol. 10, Issue 1) Peer-Reviewed

  Mar. 20164,154 words Report 1360LThe current novel research work emphasis on the production and characterization of the pectin lyase (PL) and polygalacturonase (PG) from Bacillus cereus GS-2 by utilizing the agro-industrial pectin rich substrates i.e....
• Select Recent Data from C. Brachelente and Co-Authors Highlight Findings in Cutaneous Melanoma (Transcriptome Analysis of Canine Cutaneous Melanoma and Melanocytoma Reveals a Modulation of Genes Regulating Extracellular Matrix Metabolism and Cell Cycle)

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  Recent Data from C. Brachelente and Co-Authors Highlight Findings in Cutaneous Melanoma (Transcriptome Analysis of Canine Cutaneous Melanoma and Melanocytoma Reveals a Modulation of Genes Regulating Extracellular Matrix Metabolism and Cell Cycle)

  From:Obesity, Fitness & Wellness Week

  Aug. 26, 2017407 words Report 1490L2017 AUG 26 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- New research on Oncology - Cutaneous Melanoma is the subject of a report. According to news reporting originating from...
• Select Massively parallel single-nucleus RNA-seq with DroNc-seq

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  Massively parallel single-nucleus RNA-seq with DroNc-seq

  Authors:Naomi Habib, Inbal Avraham-Davidi, Anindita Basu, Tyler Burks, Karthik Shekhar, Matan Hofree, et al.From:Nature Methods (Vol. 14, Issue 10) Peer-Reviewed

  Oct. 20179,897 words Report 1720LAuthor(s): Naomi Habib [1, 2, 3]; Inbal Avraham-Davidi [1]; Anindita Basu [1, 4]; Tyler Burks [1]; Karthik Shekhar [1]; Matan Hofree [1]; Sourav R Choudhury [2, 3]; François Aguet [2]; Ellen Gelfand [2]; Kristin Ardlie...
• Select Data on Lymphocytes Reported by Researchers at University of Southampton (IL-12 and IL-15 induce the expression of CXCR6 and CD49a on peripheral natural killer cells)

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  Data on Lymphocytes Reported by Researchers at University of Southampton (IL-12 and IL-15 induce the expression of CXCR6 and CD49a on peripheral natural killer cells)

  From:Obesity, Fitness & Wellness Week

  Oct. 14, 2017502 words Report 1460L2017 OCT 14 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Investigators publish new report on Lymphocytes. According to news reporting originating from Southampton, United...